{"id":160,"date":"2018-10-17T03:32:29","date_gmt":"2018-10-17T00:32:29","guid":{"rendered":"http:\/\/drkaratutlu.com\/?page_id=160"},"modified":"2026-04-13T16:40:47","modified_gmt":"2026-04-13T13:40:47","slug":"portfolio","status":"publish","type":"page","link":"http:\/\/drkaratutlu.com\/en\/tr\/portfolio\/","title":{"rendered":"Original Journal Papers"},"content":{"rendered":"<h1>A. Karatutlu, PhD in Physics<\/h1>\n<p><b class=\"large\">Web of Science ResearcherID:<\/b> <a class=\"very-dark-gray-link\" title=\"Copy and share this profile's URL\" href=\"https:\/\/publons.com\/researcher\/B-2171-2019\/\">B-2171-2019<\/a><\/p>\n<p><a href=\"https:\/\/www.researchgate.net\/profile\/A_Karatutlu\">Researchgate profile<\/a><\/p>\n<p><a href=\"https:\/\/scholar.google.co.uk\/citations?user=vCvQyAUAAAAJ&amp;hl=en&amp;authuser=1\">Google scholar profile<\/a><\/p>\n<p><a href=\"https:\/\/orcid.org\/0000-0002-8819-4916\">Orcid #: 0000-0002-8819-4916<\/a><\/p>\n<h1><span style=\"color: #ff0000;\">Orijinal Ara\u015ft\u0131rma Makaleleri<\/span><\/h1>\n<h2><span style=\"color: #ff0000;\">2026<\/span><\/h2>\n<p>[25] Yusuf Aslan, Esma Derin, Kutay Sagdic, Timuc\u0327in Emre Tabaru, <strong>Ali Karatutlu<\/strong>, Bu\u0308lend Ortac\u0327, and Fatih Inci<\/p>\n<p><a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acsami.5c24749\">Spatiotemporal Confinements of Distance-Dependent Emitters for Enhancing Plasmonic Signals\u00a0<\/a><\/p>\n<p><span class=\"cit-fg-title\"><i>ACS Appl. Mater. Interfaces<\/i><\/span><span class=\"cit-fg-year\"> 2026 Vol 18\/Issue 7 doi: 10.1021\/acsami.5c24749<\/span><\/p>\n<h2><span style=\"color: #ff0000;\">2025<\/span><\/h2>\n<p><strong>[24] Ali Karatutlu<\/strong><\/p>\n<p><a class=\"issue-item__title\" href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/pssr.202500289\">Amorphous Germanium Thin Films on Kapton Tape Fabricated Using Electron Beam Evaporation as Flexible \u03b3-Ray Radiation Monitoring Materials<\/a><\/p>\n<p><i>Phys. Status Solidi RRL<\/i>,\u00a0<span class=\"pubYear\">2025<\/span>,\u00a0<span class=\"vol\">000<\/span>, e202500289,\u00a0<a class=\"linkBehavior\" href=\"https:\/\/doi.org\/10.1002\/pssr.202500289\">https:\/\/doi.org\/10.1002\/pssr.202500289<\/a>.<\/p>\n<p><strong>[23] <\/strong>Murat M\u0131s\u0131r, Saliha Mutlu, Servin Bagheralmoosavi, B\u00fclend Orta\u00e7, <strong>Ali Karatutlu<\/strong>, G\u00fcrkan Ye\u015fil\u00f6z, Sevil Savaskan Y\u0131lmaz<\/p>\n<p><a href=\"https:\/\/advanced.onlinelibrary.wiley.com\/toc\/21967350\/0\/0\">Synthesis and Characterization of Py(PCL), Py(PLLA) \u00a0Homopolymers, and Py(PCL-b-PLLA) Copolymers via Ring-Opening Polymerization: Determination of Structural, Optical, and Biocompatible Properties<\/a><\/p>\n<p><i>Adv. Mater. Interfaces<\/i>\u00a0<span class=\"vol\">12<\/span>, no.\u00a0<span class=\"citedIssue\">19<\/span>\u00a0(<span class=\"pubYear\">2025<\/span>): e00195.\u00a0<a class=\"linkBehavior\" href=\"https:\/\/doi.org\/10.1002\/admi.202500195\">https:\/\/doi.org\/10.1002\/admi.202500195<\/a><\/p>\n<h2><span style=\"color: #ff0000;\">2024<\/span><\/h2>\n<p><strong>[22] <\/strong>Saliha Mutlu,\u00a0B\u00fclend Orta\u00e7, <strong>Ali Karatutlu<\/strong>, Taylan G\u00f6rkan, Engin Durgun, Dilek Soyler, Saniye Soylemez, Nergis Arsu, Sevil Savaskan Y\u0131lmaz<\/p>\n<p><strong>\u00a0<a href=\"https:\/\/advanced.onlinelibrary.wiley.com\/doi\/epdf\/10.1002\/admt.202401245\" target=\"_blank\" rel=\"noreferrer noopener\" data-type=\"URL\" data-id=\"https:\/\/www.mdpi.com\/2073-4360\/15\/10\/2326\">Engineering of the high-power laser-induced synthesis of Ni-based metal-organic framework: Investigation of its optical properties, computational methodology, electrocatalytic performances and glucose-sensing ability<\/a><\/strong><\/p>\n<p>Advanced Materials Technologies (2024) DOI: 10.1002\/admt.202401245<\/p>\n<h2><span style=\"color: #ff0000;\">2023<\/span><\/h2>\n<p><strong>[21] <\/strong>Timu\u00e7in Emre Tabaru, <strong>Ali Karatutlu, <\/strong> and B\u00fclend Orta\u00e7<\/p>\n<p><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S0030399223005868\" data-rich-text-format-boundary=\"true\"><em>Phase-Shifted Bragg-Grating Consisting of Silicon Oxynitride Doped Silicon and Silica Alternating Layers Lab-on-Fiber for Biosensors with Ultrahigh Sensitivity and Ultra-Low Detection Limit<\/em> <\/a>2023, Optics &amp; Lasers Technology DOI: <a class=\"anchor doi anchor-default\" title=\"Persistent link using digital object identifier\" href=\"https:\/\/doi.org\/10.1016\/j.optlastec.2023.109693\" target=\"_blank\" rel=\"noreferrer noopener\" aria-label=\"Persistent link using digital object identifier\"><span class=\"anchor-text\">10.1016\/j.optlastec.2023.109693<\/span><\/a><\/p>\n<section class=\"ReferencedArticles\"><\/section>\n<section class=\"ReferencedArticles\"><\/section>\n<p><strong>[20] Ali Karatutlu, <\/strong>Timu\u00e7in Emre Tabaru, and B\u00fclend Orta\u00e7<\/p>\n<p><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/adom.202300094\" data-rich-text-format-boundary=\"true\">Low-temperature synthesis of Silicon Oxynitride-doped Si for tunable Bragg gratings homogeneously deposited on Si, SiO2 and borosilicate substrates and the tip of SM and PM optical fibers, <\/a>2023, Advanced Optical Materials DOI: 10.1002\/adom.202300094<\/p>\n<h2><span style=\"color: #ff0000;\">2022<\/span><\/h2>\n<p><strong>[19] <\/strong>Esra Kendir Tekgul, Yakup Midilli, Huseyin Can \u00c7ami\u00e7i, Elif Yapar Y\u0131ld\u0131r\u0131m, <strong>Ali Karatutlu<\/strong> and B\u00fclend Orta\u00e7 <strong><a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00340-022-07891-y\">Effects of Gamma Radiation on Yb-doped Al-P-Silicate Optical Fibers<\/a><\/strong>\u00a0 Applied Physics B: Lasers and Optics <strong>128,\u00a0<\/strong>170 (2022) DOI: 10.1007\/s00340-022-07891-y<\/p>\n<p><strong>[18] Ali Karatutlu, <\/strong>Elif Yapar Y\u0131ld\u0131r\u0131m, Esra Kendir, Yakup Midilli, Samet Ak\u00e7imen,\u00a0B\u00fclend Orta\u00e7 <strong><a href=\"https:\/\/doi.org\/10.1016\/j.yofte.2022.102836\" data-type=\"URL\" data-id=\"https:\/\/www.sciencedirect.com\/journal\/optical-fiber-technology\">Fabrication of Biaxial Polarization-Maintaining Optical Fiber with Ultra-Low Bending-Dependent Polarization Extinction Ratio Deterioration<\/a>\u00a0 Optical Fiber Technology <\/strong>Volume 69, March 2022, 1028362022 DOI: 10.1016\/j.yofte.2022.102836<\/p>\n<h2><span style=\"color: #ff0000;\">2020<\/span><\/h2>\n<p><strong>[17]<\/strong> \u0130. Seker, <strong>A. Karatutlu<\/strong>, K Golcuk, M. Karakiz, B. Orta\u00e7,<a href=\"https:\/\/rdcu.be\/b4y0m\">A Systematic Study on Au-capped Si Nanowhiskers for Size-Dependent Improved Biosensing Applications,<\/a> <strong>Plasmonics<\/strong>, 15:1739\u20131745 (2020) DOI: 10.1007\/s11468-020-01195-7<\/p>\n<p><strong>[16]<\/strong> <strong>A. Karatutlu, <\/strong><a href=\"http:\/\/journals.tubitak.gov.tr\/physics\/issues\/fiz-20-44-1\/fiz-44-1-5-1908-6.pdf\">Atomic layer deposition of zirconium oxide thin film on an optical fiber for cladding light strippers, <\/a><strong>Turkish Journal of Physics<\/strong>, DOI: <a href=\"http:\/\/journals.tubitak.gov.tr\/physics\/issues\/fiz-20-44-1\/fiz-44-1-5-1908-6.pdf\">10.3906\/fiz-1908-6<\/a>, Available online: 07.01.2020<\/p>\n<div>\n<div><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter  wp-image-873\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2020\/01\/TOC-Image.png\" alt=\"\" width=\"289\" height=\"258\" \/><\/div>\n<div>\n<h2 style=\"text-align: left;\"><span style=\"color: #ff0000;\">2019<\/span><\/h2>\n<\/div>\n<\/div>\n<p><strong>[15]<\/strong> E. Y. Y\u0131ld\u0131r\u0131m, <strong>A. Karatutlu<\/strong>, E. T. Balk, Y. Midilli, B. Orta\u00e7 <a href=\"https:\/\/www.osapublishing.org\/ao\/upcoming_pdf.cfm?id=361916\">Combined method for the fabrication of high-power cladding light stripper using buffered oxide etchant\u00a0 <\/a><strong>Applied Optics<\/strong>,\u00a0Vol. 58, Issue 25,pp. 6926-6933(2019) <a href=\"https:\/\/www.osapublishing.org\/ao\/upcoming_pdf.cfm?id=361916\"><span style=\"color: #ff0000;\">Click here to read more<\/span><\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter  wp-image-842\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/07\/CLS-by-BOE.png\" alt=\"\" width=\"317\" height=\"159\" srcset=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/07\/CLS-by-BOE.png 1024w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/07\/CLS-by-BOE-300x151.png 300w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/07\/CLS-by-BOE-768x386.png 768w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/07\/CLS-by-BOE-350x176.png 350w\" sizes=\"auto, (max-width: 317px) 100vw, 317px\" \/><\/p>\n<p>Cladding light strippers are vital and one of the critical components for high-power fiber laser applications. In this study, we show the first studies of the formation mechanisms and optimum conditions of a cladding light stripper(CLS) device using a buffered oxide etchant by a combined method of stain (wet) etching and vapor phase etching.This high-power CLS was shown to result in a stripping performance of ~17.2 dB at the launched power of 333 W(pump limited).<\/p>\n<p>[<strong>14] <\/strong>C. Candan, A. A. Seymen,<strong> A. Karatutlu<\/strong>, M. Tiken, Y. Midilli, ,E. Orhan, H. Berbero\u011flu, B. Orta\u00e7 <span style=\"color: #ff0000;\"><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0143816618317342?dgcid=author\">Performance Evaluation of Fiber-based Ballistic Composites against Laser Threats<\/a><span style=\"color: #000000;\">,<\/span><\/span><strong> <span style=\"color: #000000;\"><span style=\"color: #ff0000;\"><span style=\"color: #000000;\">Optics and Lasers in Engineering<\/span><\/span><\/span><\/strong><span style=\"color: #ff0000;\"> Volume 121, October 2019, Pages 54-60<br \/>\n<\/span><\/p>\n<p>Click doi: <a class=\"doi\" title=\"Persistent link using digital object identifier\" href=\"https:\/\/doi.org\/10.1016\/j.optlaseng.2019.03.016\" target=\"_blank\" rel=\"noreferrer noopener\" aria-label=\"Persistent link using digital object identifier\">10.1016\/j.optlaseng.2019.03.016<\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-813\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/03\/BORTAC_Elsevier_2018_Graphical_Abstract.png\" alt=\"\" width=\"275\" height=\"129\" srcset=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/03\/BORTAC_Elsevier_2018_Graphical_Abstract.png 2356w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/03\/BORTAC_Elsevier_2018_Graphical_Abstract-300x141.png 300w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/03\/BORTAC_Elsevier_2018_Graphical_Abstract-768x361.png 768w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/03\/BORTAC_Elsevier_2018_Graphical_Abstract-1024x481.png 1024w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2019\/03\/BORTAC_Elsevier_2018_Graphical_Abstract-350x164.png 350w\" sizes=\"auto, (max-width: 275px) 100vw, 275px\" \/><\/p>\n<p>In this study, a specially developed composite material for the ballistic applications was shined to a continuous wave (CW) laser beam at 915\u202fnm. At the instant of the exposure, the region of interest was completely evaporated and punctured with a slight swelling around the hole where the temperature was over 450 \u00b0C. The composite material was drilled completely upon exceeding 20\u202fkJ of laser energy.<\/p>\n<h2><span style=\"color: #ff0000;\">2018<\/span><\/h2>\n<p>[<strong>13] A. Karatutlu<\/strong>, F. S. Boi, R. Wilson, O. Ersoy, B. Orta\u00e7 , A. Sapelkin <span style=\"color: #ff0000;\"><a style=\"color: #ff0000;\" href=\"https:\/\/onlinelibrary.wiley.com\/journal\/15214079\">A Bean-like Formation of Nanoparticles inside the Carbon Nanotubes: Colloidal Germanium Nanoparticles Implanted throughout Iron-filled CNTs <\/a><\/span><strong>\u00a0Crystal Research &amp; Technology <\/strong>2018-10-22<br \/>\nClick doi: <a href=\"https:\/\/doi.org\/10.1002\/crat.201800123\">10.1002\/crat.2<wbr \/>01800123<\/a><\/p>\n<p><a href=\"http:\/\/drkaratutlu.com\/en\/tr\/wp-content\/uploads\/2018\/10\/Ge-NPs-IF-CNTs.png\/\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-365\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Ge-NPs-IF-CNTs-300x130.png\" alt=\"\" width=\"360\" height=\"156\" srcset=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Ge-NPs-IF-CNTs-300x130.png 300w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Ge-NPs-IF-CNTs-350x152.png 350w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Ge-NPs-IF-CNTs.png 754w\" sizes=\"auto, (max-width: 360px) 100vw, 360px\" \/><\/a><span tabindex=\"0\"><b>A recipe for a junction of Ge\/Fe inside a single CNT<\/b> is demonstrated with a bean\u2010like deposition of Ge NPs. The results indicate that Ge NPs and IF\u2010CNTs demonstrate cocatalytic activity in increasing the respective sizes, which are dramatically larger than those obtained by the conventional approaches.<\/span><\/p>\n<p><strong>[12] A Karatutlu<\/strong>, \u00a0B Patil, \u2026, A. Sapelkin Structural, Optical, <span style=\"color: #ff0000;\"><strong>Electrical and Electrocatalytic Activity Properties Of Luminescent Organic Carbon Quantum Dots<\/strong><\/span> <strong>3<\/strong>\/17 2018 <strong>Chemistry Select<\/strong> Click doi: <a href=\"https:\/\/doi.org\/10.1002\/slct.201800714\">10.1002\/slct.201800714<\/a><\/p>\n<p><a href=\"http:\/\/drkaratutlu.com\/en\/tr\/wp-content\/uploads\/2018\/10\/TOC-graphic.png\/\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-medium wp-image-420\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/TOC-graphic-300x169.png\" alt=\"\" width=\"300\" height=\"169\" srcset=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/TOC-graphic-300x169.png 300w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/TOC-graphic-350x197.png 350w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/TOC-graphic.png 640w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><strong>We demonstrate organic carbon quantum dots (qdots) containing nitrile bonded (C\u2261N bond) <i>d\u2010glucos<\/i>e\u2010like traces<\/strong> in various sizes obtained from wheat flour to be promising for imaging applications and to possess a relaxor ferroelectric property and an enhanced electrocatalytic activity that could reduce the cost of energy devices and simple to scale up for the commercialization.<\/p>\n<p><strong>[11]<\/strong> \u015eeker, \u0130., <strong>Karatutlu, A.<\/strong> &amp; \u0130stengir, S. <span style=\"color: #ff0000;\"><strong>Preferential MBE Growth and Characterization of SiGe Nanoislands on Depth-Selective Si Pits Etched by Ar + Plasma<\/strong><\/span>. <strong>Phys. status solidi &#8211; Rapid Res. Lett. <\/strong>1700424 (2018). doi:<a href=\"https:\/\/doi.org\/10.1002\/pssr.201700424\">10.1002\/pssr.201700424<\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"image aligncenter\" src=\"https:\/\/wol-prod-cdn.literatumonline.com\/cms\/attachment\/eee00754-34d8-4b85-b44e-0c2523df8271\/pssr201700424-blkfxd-0001-m.jpg\" width=\"369\" height=\"198\" \/><\/p>\n<p><span tabindex=\"0\"><strong>Preferential deposition of SiGe nanoislands<\/strong> <strong>is selectively<\/strong> <strong>demonstrated inside Si nanopits<\/strong> depending on the pit depth. Surface migration plays a role in the deposited Si pits where the selective behavior is surpassed and the SiGe nanoislands are grown all along the Si surface. Such an approach obtained in an MBE system gives the advantage of preparation of different depths and coating thicknesses in situ. <\/span><\/p>\n<p>[<strong>10<\/strong>] I Seker, <strong>A. Karatutlu<\/strong>, O Gurbuz, S Yanik, Y Bakis, M Karakiz (2018) <span style=\"color: #ff0000;\"><strong>Structural and electrical investigations of MBE-grown SiGe nanoislands<\/strong><\/span> <strong>App. Phys. A Materials Science &amp; Eng.<\/strong> DOI: <a href=\"https:\/\/doi.org\/10.1007\/s00339-017-1448-6\">10.1007\/s00339-017-1448-6<\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter\" src=\"https:\/\/media.springernature.com\/lw785\/springer-static\/image\/art%3A10.1007%2Fs00339-017-1448-6\/MediaObjects\/339_2017_1448_Fig2_HTML.jpg\" alt=\"Fig. 2\" width=\"231\" height=\"373\" \/><\/p>\n<p><strong>SiGe nanoislands were grown by Molecular Beam Epitaxy (MBE) method on Si (100) substrates with comparative growth parameters<\/strong> such as annealing temperature, top Ge content and layer-by-layer annealing (LBLA).<\/p>\n<h2 style=\"text-align: left;\"><span style=\"color: #ff0000;\">2017<\/span><\/h2>\n<p><strong>[9] Karatutlu A<\/strong>, Istengir S, Cosgun S, Seker I, Unal B. <span style=\"color: #ff0000;\"><strong>Decalin-assisted light emitting porous Si formation and its optical, surface and morphological properties.<\/strong><\/span> <strong><em>Appl Surf Sci<\/em><\/strong> 2017;422:498\u2013503. doi:<a href=\"https:\/\/doi.org\/10.1016\/j.apsusc.2017.06.057\">10.1016\/j.apsusc.2017.06.057<\/a>.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter\" src=\"https:\/\/ars.els-cdn.com\/content\/image\/1-s2.0-S0169433217317129-fx1.jpg\" alt=\"\" width=\"328\" height=\"267\" \/><\/p>\n<p><strong>We report the optimum conditions for production of the most efficient Lep-Si<\/strong> using decalin (decahydronaphtalene) and possible structural origins of light emission using the depth dependent luminescence measurements.<\/p>\n<p><strong>[8]<\/strong> M. Song, <strong>A. Karatutlu<\/strong>, I. Ali, O. Ersoy, Y. Zhou, Y. Yang, Y. Zhang, W. R. Little, A. P. Wheeler, and A. V. Sapelkin, \u201c<span style=\"color: #ff0000;\"><strong>\u00c7ok k\u00fc\u00e7\u00fck Ge kuantum noktac\u0131klar\u0131 kullanarak, spektroskopik s\u00fcper \u00e7\u00f6z\u00fcn\u00fcrl\u00fckl\u00fc h\u00fccre g\u00f6r\u00fcnt\u00fclemesi ger\u00e7ekle\u015ftirilmi\u015ftir.<\/strong><\/span>\u201d <strong><em>Opt. Express<\/em><\/strong>, vol. 25, no. 4, p. 4240, Feb. 2017. DOI: <a href=\"https:\/\/doi.org\/10.1364\/OE.25.004240\">10.1364\/OE.25.004240<\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"img-thumbnail hidden-xs article-thumbnail_img aligncenter\" src=\"https:\/\/www.osapublishing.org\/getThumbnail.cfm?uri=oe-25-4-4240&amp;s=n\" alt=\"Article Cover\" width=\"138\" height=\"138\" \/><\/p>\n<p><strong>We demonstrate a spectroscopic imaging based super-resolution approach by separating the overlapping diffraction spots<\/strong> into several detectors during a single scanning period and taking advantage of the size-dependent emission wavelength in nanoparticles. This approach has been tested using off-the-shelf quantum dots (Invitrogen Qdot) and in-house novel ultra-small (~3 nm) Ge QDs.<\/p>\n<h2 style=\"text-align: left;\"><span style=\"color: #ff0000;\">2016<\/span><\/h2>\n<p><strong>[7]<\/strong> Zhang, Y., Ersoy, O., <strong>Karatutlu, A<\/strong>. &amp; Sapelkin, A. (2016) <span style=\"color: #ff0000;\"><strong>Local structure of amorphous and nanoscale systems by numerical XANES calculations.<\/strong><\/span> <strong><em>Journal of Non-Crystalline Solids<\/em><\/strong>. 1\u20136. Click doi:<a href=\"https:\/\/doi.org\/10.1016\/j.jnoncrysol.2016.07.001\">10.1016\/j.jnoncrysol.2016.07.001<\/a>.<\/p>\n<p><a href=\"http:\/\/drkaratutlu.com\/en\/tr\/wp-content\/uploads\/2018\/10\/2016-JSR-2.png\/\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-430\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/2016-JSR-2-118x300.png\" alt=\"\" width=\"112\" height=\"285\" srcset=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/2016-JSR-2-118x300.png 118w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/2016-JSR-2-98x250.png 98w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/2016-JSR-2.png 160w\" sizes=\"auto, (max-width: 112px) 100vw, 112px\" \/><\/a><strong>We reproduce the key spectral features in XANES calculations of Ge nanoparticles using the final difference method of FDMNES code.<\/strong> We suggest ways of resolving remaining outstanding issues arising from combination of disorder, size and surface effects.<\/p>\n<h2 style=\"text-align: left;\"><span style=\"color: #ff0000;\">2015<\/span><\/h2>\n<p><strong>[6] Ali Karatutlu,<\/strong> Osman Ersoy, Willim R. Little, Yuanpeng Zhang, Isa Seker\u00a0 and\u00a0 Andrei Sapelkin:\u00a0 <span style=\"color: #ff0000;\"><strong>Laser-induced particle size tunes and structural transformations in germanium nanoparticles prepared by stain etching and colloidal synthesis route.<\/strong><\/span> <strong>Journal of Applied Physics<\/strong> <strong>2015<\/strong> 118 (24), 244303 Click doi:<a href=\"https:\/\/doi.org\/10.1063\/1.4939066\">10.1063\/1.4939066<\/a><\/p>\n<p><a href=\"http:\/\/drkaratutlu.com\/en\/tr\/wp-content\/uploads\/2018\/10\/Journal-of-applied-physicsTOC-last-1.png\/\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-432\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Journal-of-applied-physicsTOC-last-1-287x300.png\" alt=\"\" width=\"203\" height=\"212\" srcset=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Journal-of-applied-physicsTOC-last-1-287x300.png 287w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Journal-of-applied-physicsTOC-last-1-768x802.png 768w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Journal-of-applied-physicsTOC-last-1-239x250.png 239w, http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/Journal-of-applied-physicsTOC-last-1.png 945w\" sizes=\"auto, (max-width: 203px) 100vw, 203px\" \/><\/a><strong>Systematic studies of the laser exposure on Ge nanoparticles prepared by colloidal synthesis results in the fact that the explosive crystallisation<\/strong> is common for H-terminated and partially disordered Ge nanoparticles regardless of its particle size. We suggest possible bio-medical applications for the observed phenomena.<\/p>\n<p><strong>[5]<\/strong> Yuanpeng Zhang, Osman Ersoy, <strong>Ali Karatutlu<\/strong>, Andrei Sapelkin: <strong><span style=\"color: #ff0000;\">The local structure of Ge quantum dots determined by combined numerical analysis of extended x-ray absorption fine structure and x-ray absorption near-edge structure data.<\/span><\/strong> <strong>Journal of Synchrotron Radiation 10\/2015<\/strong>; 23 (1) Click doi:<a href=\"https:\/\/doi.org\/10.1107\/S160057751501913X\">10.1107\/S160057751501913X<\/a><\/p>\n<p><a href=\"http:\/\/drkaratutlu.com\/en\/tr\/wp-content\/uploads\/2018\/10\/JSR1.png\/\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-437\" src=\"http:\/\/drkaratutlu.com\/wp-content\/uploads\/2018\/10\/JSR1.png\" alt=\"\" width=\"250\" height=\"115\" \/><\/a><\/p>\n<p><strong>The sensitivity of X-ray absorption near-edge structure (XANES) to the local symmetry has been investigated in small (<img decoding=\"async\" src=\"http:\/\/scripts.iucr.org\/logos\/entities\/sim_rmgif.gif\" alt=\"~\" border=\"0\" \/>4\u00a0nm) matrix-free Ge quantum dots.<\/strong> The <span class=\"it\"><i>FDMNES<\/i><\/span> package was used to calculate the theoretical XANES spectra that were compared with the experimental data of as-prepared and annealed nanoparticles.<\/p>\n<p><strong>[4]<\/strong> Niccolo R. C. Corsini, Yuanpeng Zhang, William R Little, <strong>Ali Karatutlu<\/strong>, Osman Ersoy, Peter D Haynes, Carla Molteni, Nicholas D M Hine, Jesus Gonzalez, Ignacio Hernandez, Fernando Rodriguez, Vadim V Brazhkin, Andrei V Sapelkin: <em><strong><span style=\"color: #ff0000;\">Pressure-Induced Amorphization and a New High Density Amorphous Metallic Phase in Matrix-Free Ge Nanoparticles.<\/span><\/strong><\/em> <strong>Nano Letters 10\/2015<\/strong>; Click doi:<a href=\"https:\/\/doi.org\/10.1021\/acs.nanolett.5b02627\">10.1021\/acs.nanolett.5b02627<\/a><\/p>\n<p><img decoding=\"async\" src=\"https:\/\/pubs.acs.org\/na101\/home\/literatum\/publisher\/achs\/journals\/content\/nalefd\/2015\/nalefd.2015.15.issue-11\/acs.nanolett.5b02627\/20151105\/images\/medium\/nl-2015-026272_0006.gif\" \/><\/p>\n<p><strong>Here, we report on the remarkable behavior of small (under \u223c5 nm) matrix-free Ge nanoparticles under hydrostatic compression that is drastically different from both larger nanoparticles and bulk Ge.<\/strong> We discover that the application of pressure drives surface-induced amorphization leading to Ge\u2013Ge bond overcompression and eventually to a polyamorphic semiconductor-to-metal transformation.<\/p>\n<p><strong>[3]<\/strong> <strong>Ali Karatutlu<\/strong>, Mingying Song, Ann P. Wheeler, Osman Ersoy, William R. Little, Yuanpeng Zhang, Pascal Puech, Filippo S. Boi, Zofia Luklinska, Andrei V. Sapelkin: <strong><span style=\"color: #ff0000;\"><em>Synthesis and structure of free-standing Germanium quantum dots and their application in live cell imaging<\/em>.<\/span> RSC Advances<\/strong> <strong>02\/2015<\/strong>; 5(26-26):20566-20573. Click doi:<a href=\"https:\/\/doi.org\/10.1039\/c5ra01529d\">10.1039\/c5ra01529d<\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter\" title=\"Graphical abstract\" src=\"https:\/\/pubs.rsc.org\/en\/Image\/Get?imageInfo.ImageType=GA&amp;imageInfo.ImageIdentifier.ManuscriptID=C5RA01529D\" alt=\"Graphical abstract: Synthesis and structure of free-standing germanium quantum dots and their application in live cell imaging\" width=\"234\" height=\"214\" \/><\/p>\n<p><strong>The structure of the as-prepared Ge quantum dots that were found is best described by a core\u2013shell model<\/strong> with a small crystalline core and an amorphous outer shell with a surface that was terminated by hydrogen-related species. Investigation of toxicity, based on a viability test, of as-prepared uncoated Ge quantum dots in HeLa cells was carried out and compared with the commercial carboxyl coated CdSe\/ZnSe quantum dots. The viability tests show that Ge quantum dots are less toxic when compared to commercial carboxyl coated CdSe\/ZnS quantum dots.<\/p>\n<p><strong>[2]<\/strong> Yuanpeng Zhang, <strong>Ali <\/strong><strong>Karatutlu<\/strong>, Osman Ersoy, William Little, Giannantonio Cibin, Andy Dent, Andrei Sapelkin: <strong><span style=\"color: #ff0000;\"><em>Structure and effects of annealing in colloidal matrix-free Ge quantum dots<\/em>. <\/span>Journal of Synchrotron Radiation 01\/2015<\/strong>; 22(1-1):105-112. <a href=\"https:\/\/doi.org\/10.1107\/S1600577514022486\">Click doi:10.1107\/S1600577514022486<\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" id=\"rv5023issthumbinmain\" class=\"aligncenter\" src=\"http:\/\/scripts.iucr.org\/cgi-bin\/sendimage?image=\/s\/issues\/2015\/01\/00\/rv5023\/rv5023thumbnail.gif\" alt=\"link to html\" width=\"158\" height=\"153\" \/><\/p>\n<p><strong>It was found that as-prepared samples possess distinctly different structures depending on their synthesis route<\/strong> as <strong>indicated by their long-range ordering.<\/strong> An appreciable amount of oxygen was found to be bound to Ge in samples prepared with GeO<span class=\"inf\"><sub>2<\/sub><\/span> as a precursor; however, not for GeCl<span class=\"inf\"><sub>4<\/sub><\/span>.Annealing in an H<span class=\"inf\"><sub>2<\/sub><\/span>Ar atmosphere leads to sample crystallization and further nanoparticle growth, while at the same time reducing the Ge-O bonding.<\/p>\n<h2 style=\"text-align: left;\"><span style=\"color: #ff0000;\">2014<\/span><\/h2>\n<p><strong>[1]<\/strong> Little, W., <strong>Karatutlu, A<\/strong>., Bolmatov, D., Trachenko, K., Sapelkin, A. V, Cibin, G., Taylor, R., Mosselmans, F., Dent, A.J., Mountjoy, G., <strong>2014<\/strong>. <strong><span style=\"color: #ff0000;\">Structural origin of light emission in germanium quantum dots. <\/span>Sci. Rep<\/strong>. 4, 7372. Click doi: <a href=\"https:\/\/doi.org\/10.1038\/srep07372\">10.1038\/srep07372<\/a><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"\" src=\"https:\/\/media.springernature.com\/lw685\/springer-static\/image\/art%3A10.1038%2Fsrep07372\/MediaObjects\/41598_2014_Article_BFsrep07372_Fig1_HTML.jpg\" alt=\"figure1\" width=\"263\" height=\"198\" \/><\/p>\n<p><strong>We used a combination of optically-detected x-ray absorption spectroscopy with molecular dynamics simulations to explore the origins of light emission in small (5\u2005nm to 9\u2005nm) Ge nanoparticles.<\/strong> Two sets of nanoparticles were studied, with oxygen and hydrogen terminated surfaces.<\/p>","protected":false},"excerpt":{"rendered":"<p>A. Karatutlu, PhD in Physics Web of Science ResearcherID: B-2171-2019 Researchgate profile Google scholar profile Orcid #: 0000-0002-8819-4916 Original Research Papers 2026 [25] Yusuf Aslan, Esma Derin, Kutay Sagdic, Timuc\u0327in Emre Tabaru, Ali Karatutlu, Bu\u0308lend Ortac\u0327, and Fatih Inci Spatiotemporal Confinements of Distance-Dependent Emitters for Enhancing Plasmonic Signals\u00a0 ACS Appl. Mater. Interfaces 2026 Vol 18\/Issue [&hellip;]<\/p>","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-160","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/pages\/160","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/comments?post=160"}],"version-history":[{"count":41,"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/pages\/160\/revisions"}],"predecessor-version":[{"id":1032,"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/pages\/160\/revisions\/1032"}],"wp:attachment":[{"href":"http:\/\/drkaratutlu.com\/en\/tr\/wp-json\/wp\/v2\/media?parent=160"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}